Aquificaceae

Aquificaceae
Scientific classification
Domain:	Bacteria
Phylum:	Aquificota
Order:	Aquificales
Family:	Aquificaceae; Reysenbach 2002
Genera
	Aquifex; Hydrogenivirga; Hydrogenobacter; Thermocrinis;

The Aquificaceae family are bacteria that live in harsh environmental settings such as hot springs, sulfur pools, and hydrothermal vents. Although they are true bacteria as opposed to the other inhabitants of extreme environments, the Archaea, Aquificaceae genera are an early phylogenetic branch.^[1]

Phylogeny[edit]

The currently accepted taxonomy is based on the List of Prokaryotic names with Standing in Nomenclature (LPSN)^[2] and National Center for Biotechnology Information (NCBI)^[3]

16S rRNA based LTP_08_2023^[4]^[5]^[6]

120 marker proteins based GTDB 08-RS214^[7]^[8]^[9]

Aquificaceae

Hydrogenobaculum acidophilum (Shima & Suzuki 1993) Stohr et al. 2001

Hydrogenobacter

	H. hydrogenophilus (Kryukov et al. 1984) Stöhr et al. 2001

	H. thermophilus Kawasumi et al. 1984 (type sp.)

Thermocrinis minervae Huber et al. 1999

	Hydrogenobacter subterraneus Takai et al. 2001

	Thermothrix azorensis Odintsova et al. 1996

Thermocrinis

	T. jamiesonii Dodsworth et al. 2015

	T. ruber Huber et al. 1999 (type sp.)

Thermocrinis albus Eder and Huber 2002

Aquifex pyrophilus Huber and Stetter 1992 (type sp.)

Hydrogenivirga

	H. calditorris Nakagawa et al. 2004 (type sp.)

	H. okinawensis Nunoura et al. 2008

"Hydrogenobaculaceae"

Hydrogenobaculum acidophilum

Aquificaceae

	Aquifex pyrophilus

	Hydrogenivirga calditorris

Thermocrinis minervae

Hydrogenobacter

	H. hydrogenophilus

	H. thermophilus

Thermocrinis

	T. albus

	T. ruber

Unassigned species:

"Aquifex aeolicus" Huber and Stetter 2001

References[edit]

Reysenbach A-L, Phylum BI (2001) Aquificae phy. nov. In: Boone DR, Castenholz RW (eds) Bergey's Manual of Systematic Bacteriology. Springer-Verlag, Berlin, 2nd edn., pp. 359–367

^ Madigan M; Martinko J, eds. (2005). Brock Biology of Microorganisms (11th ed.). Prentice Hall. ISBN 0-13-144329-1.
^ J.P. Euzéby. "Aquificaceae". List of Prokaryotic names with Standing in Nomenclature (LPSN). Retrieved 2022-09-09.
^ Sayers; et al. "Aquificaceae". National Center for Biotechnology Information (NCBI) taxonomy database. Retrieved 2022-09-09.
^ "The LTP". Retrieved 20 November 2023.
^ "LTP_all tree in newick format". Retrieved 20 November 2023.
^ "LTP_08_2023 Release Notes" (PDF). Retrieved 20 November 2023.
^ "GTDB release 08-RS214". Genome Taxonomy Database. Retrieved 10 May 2023.
^ "bac120_r214.sp_label". Genome Taxonomy Database. Retrieved 10 May 2023.
^ "Taxon History". Genome Taxonomy Database. Retrieved 10 May 2023.

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[1] Madigan M; Martinko J, eds. (2005). Brock Biology of Microorganisms (11th ed.). Prentice Hall. ISBN 0-13-144329-1.

[LPSN-2] J.P. Euzéby. "Aquificaceae". List of Prokaryotic names with Standing in Nomenclature (LPSN). Retrieved 2022-09-09.

[NCBI-3] Sayers; et al. "Aquificaceae". National Center for Biotechnology Information (NCBI) taxonomy database. Retrieved 2022-09-09.

[LTP-4] "The LTP". Retrieved 20 November 2023.

[5] "LTP_all tree in newick format". Retrieved 20 November 2023.

[6] "LTP_08_2023 Release Notes" (PDF). Retrieved 20 November 2023.

[about-7] "GTDB release 08-RS214". Genome Taxonomy Database. Retrieved 10 May 2023.

[tree-8] "bac120_r214.sp_label". Genome Taxonomy Database. Retrieved 10 May 2023.

[taxon_history-9] "Taxon History". Genome Taxonomy Database. Retrieved 10 May 2023.

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Phylogeny[edit]

See also[edit]

References[edit]